Hypre - Revision history

Admin: /* Mac Snow Leopard Server - Hypre 2.7.0b */

2017-10-10T01:07:46Z

Mac Snow Leopard Server - Hypre 2.7.0b

← Older revision		Revision as of 01:07, 10 October 2017
Line 76:		Line 76:
	To get Hypre built on a Snow Leopard server, I needed to do some kind of fishy things with configure (see [[#Duplicate symbol start]] in [[#Installation Errors]] section below):		To get Hypre built on a Snow Leopard server, I needed to do some kind of fishy things with configure (see [[#Duplicate symbol start]] in [[#Installation Errors]] section below):

	<~~source lang="bash"~~>		<pre>
	#!/bin/sh		#!/bin/sh
	#		#
Line 99:		Line 99:
	CXXFLAGS="-DMPIPP_H -arch x86_64" \		CXXFLAGS="-DMPIPP_H -arch x86_64" \
	CFLAGS="-DMPIPP_H -arch x86_64"		CFLAGS="-DMPIPP_H -arch x86_64"
	</~~source~~>		</pre>

Admin: /* Red Hat Linux */

2017-10-10T01:07:30Z

Red Hat Linux

← Older revision		Revision as of 01:07, 10 October 2017
Line 47:		Line 47:
	I was able to successfully install Hypre on a Red Hat Linux workstation with [[OpenMPI]] with the following configure line:		I was able to successfully install Hypre on a Red Hat Linux workstation with [[OpenMPI]] with the following configure line:

	<~~source lang="bash"~~>		<pre>
	#!/bin/sh		#!/bin/sh
	#		#
Line 70:		Line 70:
	CFLAGS="-DMPIPP_H" \		CFLAGS="-DMPIPP_H" \
	CXXFLAGS="-DMPIPP_H"		CXXFLAGS="-DMPIPP_H"
	</~~source~~>		</pre>

	=== Mac Snow Leopard Server - Hypre 2.7.0b ===		=== Mac Snow Leopard Server - Hypre 2.7.0b ===

Admin: /* Mac Leopard (OS X 10.5) - Hypre 2.0.0 */

2017-10-10T01:06:04Z

Mac Leopard (OS X 10.5) - Hypre 2.0.0

← Older revision		Revision as of 01:06, 10 October 2017
Line 19:		Line 19:
	This configure line has been used to build hypre 2.0.0 with [[LAM MPI]] on Mac Leopard.		This configure line has been used to build hypre 2.0.0 with [[LAM MPI]] on Mac Leopard.

	<~~source lang="bash"~~>		<pre>
	#!/bin/sh		#!/bin/sh
	#		#
Line 37:		Line 37:
	CFLAGS=-DMPIPP_H \		CFLAGS=-DMPIPP_H \
	CXXFLAGS=-DMPIPP_H		CXXFLAGS=-DMPIPP_H
	</~~source~~>		</pre>

	The <code>-DMPIPP_H</code> compiler flags are only required for [[LAM MPI]] and [[OpenMPI]]; they are not needed if you use any other MPI install (e.g. MPICH).		The <code>-DMPIPP_H</code> compiler flags are only required for [[LAM MPI]] and [[OpenMPI]]; they are not needed if you use any other MPI install (e.g. MPICH).

Admin: /* Examples */

2017-10-10T01:05:38Z

Examples

← Older revision		Revision as of 01:05, 10 October 2017
Line 164:		Line 164:

	After changing that, everything worked fine.		After changing that, everything worked fine.

	~~= Examples =~~

	~~{{Stub\|examples section}}~~



	= Resources =		= Resources =

Admin: /* Duplicate symbol start */

2017-10-10T01:05:29Z

Duplicate symbol start

← Older revision		Revision as of 01:05, 10 October 2017
Line 157:		Line 157:
	And the underlying problem with ''that'' is the <code>-lcrt1.10.5.o</code> flag (you can test this by creating a simple hello world C program, and running the given gcc command to compile the hello world program; you can then whittle down the flags until you find the problematic one). This somehow gets parsed from the system and put into the <code>FLIBS</code> variable. So, the <code>FLIBS</code> needs to be re-defined in the configure script to be the same thing except without <code>-lcrt1.10.5.o</code> (same problem with same solution here: [http://list.coin-or.org/pipermail/ipopt/2008-August/001232.html]):		And the underlying problem with ''that'' is the <code>-lcrt1.10.5.o</code> flag (you can test this by creating a simple hello world C program, and running the given gcc command to compile the hello world program; you can then whittle down the flags until you find the problematic one). This somehow gets parsed from the system and put into the <code>FLIBS</code> variable. So, the <code>FLIBS</code> needs to be re-defined in the configure script to be the same thing except without <code>-lcrt1.10.5.o</code> (same problem with same solution here: [http://list.coin-or.org/pipermail/ipopt/2008-August/001232.html]):

	<~~source lang="bash"~~>		<pre>
	FLIBS="-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0		FLIBS="-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0
	-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0/../../..		-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0/../../..
	-lgfortran -lgcc_ext.10.5 -lSystem"		-lgfortran -lgcc_ext.10.5 -lSystem"
	</~~source~~>		</pre>

	After changing that, everything worked fine.		After changing that, everything worked fine.

Admin: /* Error with dlamch.o */

2017-10-10T01:05:12Z

Error with dlamch.o

← Older revision		Revision as of 01:05, 10 October 2017
Line 122:		Line 122:
	Then you need to edit <code>/path/to/hypre/src/lapack/Makefile</code>, and add an <code>-fPIC</code> flag, as shown below:		Then you need to edit <code>/path/to/hypre/src/lapack/Makefile</code>, and add an <code>-fPIC</code> flag, as shown below:

	<~~syntaxhighlight lang="make"~~>		<pre>
	dlamch.o : dlamch.c ${LAPACK_HEADERS}		dlamch.o : dlamch.c ${LAPACK_HEADERS}
	${CC} -c -fPIC dlamch.c		${CC} -c -fPIC dlamch.c
	</~~syntaxhighlight~~>		</pre>

	===Duplicate symbol start===		===Duplicate symbol start===

Admin: /* Configuration */

2011-05-31T18:16:34Z

Configuration

← Older revision		Revision as of 18:16, 31 May 2011
Line 13:		Line 13:
	Download the hypre tarball and decompress it. Put your configure wrapper into the <code>src/</code> directory of the decompressed Hypre tarball.		Download the hypre tarball and decompress it. Put your configure wrapper into the <code>src/</code> directory of the decompressed Hypre tarball.

	===Mac Leopard (OS X 10.5)===		===Mac Leopard (OS X 10.5) - Hypre 2.0.0===

			'''NOTE: version 2.0.0 is obsolete!!! The Hypre developers recommend the latest (beta) version over 2.0.0'''

	This configure line has been used to build hypre 2.0.0 with [[LAM MPI]] on Mac Leopard.		This configure line has been used to build hypre 2.0.0 with [[LAM MPI]] on Mac Leopard.
Line 70:		Line 72:
	</source>		</source>

	=== Mac Snow Leopard Server ===		=== Mac Snow Leopard Server - Hypre 2.7.0b ===

	To get Hypre built on a Snow Leopard server, I needed to do some kind of fishy things with configure (see [[#Duplicate symbol start]] in [[#Installation Errors]] section below):		To get Hypre built on a Snow Leopard server, I needed to do some kind of fishy things with configure (see [[#Duplicate symbol start]] in [[#Installation Errors]] section below):
Line 87:		Line 89:
	--with-MPI-libs=mpi \		--with-MPI-libs=mpi \
	--with-MPI-lib-dirs=${HOME}/pkg/openmpi/1.4.3_bigmac/lib \		--with-MPI-lib-dirs=${HOME}/pkg/openmpi/1.4.3_bigmac/lib \
	--prefix=${HOME}/pkg/hypre/2.0.0_bigmac \		--prefix=${HOME}/pkg/hypre/2.7.0_bigmac \
	~~--enable-shared~~ \
	\		\
	CC="/usr/bin/gcc" \		CC="/usr/bin/gcc" \
Line 99:		Line 100:
	CFLAGS="-DMPIPP_H -arch x86_64"		CFLAGS="-DMPIPP_H -arch x86_64"
	</source>		</source>


			Note that the <code>--enable-shared</code> option will cause problems on Mac, since Mac uses a non-standard gcc.

	== Installation Errors ==		== Installation Errors ==

Admin: /* Mac Snow Leopard Server */

2011-05-29T21:56:27Z

Mac Snow Leopard Server

← Older revision		Revision as of 21:56, 29 May 2011
Line 94:		Line 94:
	F77="/usr/local/bin/gfortran" \		F77="/usr/local/bin/gfortran" \
	\		\
	FLIBS="-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0		FLIBS="-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0 -L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0/../../.. -lgfortran -lgcc_ext.10.5 -lSystem" \
	-L/usr/local/lib/gcc/x86_64-apple-darwin10.4.0/4.6.0/../../..
	-lgfortran -lgcc_ext.10.5 -lSystem" \
	\		\
	CXXFLAGS="-DMPIPP_H -arch x86_64" \		CXXFLAGS="-DMPIPP_H -arch x86_64" \
	CFLAGS="-DMPIPP_H -arch x86_64"		CFLAGS="-DMPIPP_H -arch x86_64"
	</source>		</source>

	~~'''IMPORTANT''': I have broken up the FLIBS variable into three lines, but I only did that so this page would look pretty. You should probably reformat it if/when you use it to be a single line.~~

	== Installation Errors ==		== Installation Errors ==

Admin at 16:13, 28 May 2011

2011-05-28T16:13:42Z

← Older revision		Revision as of 16:13, 28 May 2011
Line 177:		Line 177:


			{{Programs}}
	~~[[Category:Computers]]~~		{{Math Programs}}
	~~[[Category:~~Programs]]
	~~[[Category:~~Math Programs]]

Admin: /* Duplicate symbol start */

2011-05-24T20:39:31Z

Duplicate symbol start

← Older revision		Revision as of 20:39, 24 May 2011
Line 155:		Line 155:
	</pre>		</pre>

	And the underlying problem with ''that'' is the <code>-lcrt1.10.5.o</code> flag. This somehow gets parsed from the system and put into the <code>FLIBS</code> variable. So, ~~this variable~~ needs to be re-defined in the configure script to be the same thing except without <code>-lcrt1.10.5.o</code>:		And the underlying problem with ''that'' is the <code>-lcrt1.10.5.o</code> flag (you can test this by creating a simple hello world C program, and running the given gcc command to compile the hello world program; you can then whittle down the flags until you find the problematic one). This somehow gets parsed from the system and put into the <code>FLIBS</code> variable. So, the <code>FLIBS</code> needs to be re-defined in the configure script to be the same thing except without <code>-lcrt1.10.5.o</code> (same problem with same solution here: [http://list.coin-or.org/pipermail/ipopt/2008-August/001232.html]):

	<source lang="bash">		<source lang="bash">