Hypre: Difference between revisions
From charlesreid1
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If you see an error like this: | If you see an error like this: | ||
< | <pre> | ||
/usr/bin/ld: /path/to/hypre/src/utilities/dlamch.o: | /usr/bin/ld: /path/to/hypre/src/utilities/dlamch.o: | ||
relocation R_X86_64_32S against 'a local symbol' can not be used when making | relocation R_X86_64_32S against 'a local symbol' can not be used when making | ||
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could not read symbols: Bad value | could not read symbols: Bad value | ||
collect2: ld returned 1 exit status | collect2: ld returned 1 exit status | ||
</ | </pre> | ||
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${CC} -c -fPIC dlamch.c | ${CC} -c -fPIC dlamch.c | ||
</syntaxhighlight> | </syntaxhighlight> | ||
= Examples = | = Examples = | ||
Revision as of 22:30, 14 March 2011
Hypre is a massively parallelizable linear solver library written and designed for use in C++. It provides many nice features and objects beyond simple "matrix" or "vector" objects - these include grids, meshes, and stencils. It was developed at Lawrence Livermore National Lab.
Installation
Installing Hypre can be tricky. The documentation will give much more in-depth details than this page. Links to the documentation are available at https://computation.llnl.gov/casc/hypre/software.html .
Dependencies
Hypre will require an installation of MPI on your machine. I use LAM MPI, but you can also use OpenMPI.
Configuration
Download the hypre tarball and decompress it. Put your configure wrapper into the src/ directory of the decompressed Hypre tarball.
This configure line has been used to build Hypre 2.0.0, which is the latest stable release. It has not been tested on beta releases.
#!/bin/sh
#
# run configure
# make
# make install
./configure \
--with-MPI-include=/path/to/mpi/include \
--with-MPI-lib-dirs=/path/to/mpi/lib \
--with-MPI-libs="mpi lam pmpi util" \
--prefix=/path/to/hypre \
\
F77=/usr/local/bin/gfortran \
\
CFLAGS=-DMPIPP_H \
CXXFLAGS=-DMPIPP_H
The -DMPIPP_H compiler flags are only required for LAM MPI and OpenMPI; they are not needed if you use any other MPI install (e.g. MPICH).
Installation Errors
If you see an error like this:
/usr/bin/ld: /path/to/hypre/src/utilities/dlamch.o: relocation R_X86_64_32S against 'a local symbol' can not be used when making a shared object; recompile with -fPIC /path/to/hypre/src/utilities/dlamch.o: could not read symbols: Bad value collect2: ld returned 1 exit status
Then you need to edit /path/to/hypre/src/lapack/Makefile, and add an -fPIC flag, as shown below:
dlamch.o : dlamch.c ${LAPACK_HEADERS}
${CC} -c -fPIC dlamch.c
Examples
Resources
Hypre home page - http://acts.nersc.gov/hypre/